This paper introduces a conceptual framework for AI-driven scientific discovery, proposing a federated model of autonomous AI scientists. The core idea revolves around a layered stack architecture, an iterative discovery pipeline, and a governance-aligned roadmap. The authors envision AI scientists not merely as tools for accelerating discovery but as custodians of epistemic integrity, emphasizing the importance of accountability, incentives, and participatory governance. The proposed layered architecture comprises seven layers: Infrastructure, Safety & Policy Runtime, Methodology, Epistemics & Provenance, Application, Incentives & Markets, and Governance & Oversight. These layers are intended to provide a structured approach to integrating AI into scientific research. The iterative discovery pipeline outlines the steps an AI scientist would take, from tool selection and hypothesis generation to experimentation and refinement. The federated model envisions a network of AI scientists collaborating and sharing knowledge through a shared knowledge ledger and replication markets. The paper presents case studies in drug discovery, climate modeling, and materials science to illustrate the potential of this framework. These case studies, while illustrative, lack quantitative results and serve primarily as conceptual demonstrations. The authors conclude with a research roadmap for developing "Trusted AI Scientists," highlighting challenges in technical development, incentive structures, and governance. Overall, the paper presents a forward-looking vision for AI in scientific discovery, but it is primarily conceptual and lacks the technical depth and empirical validation necessary for a rigorous evaluation. The paper's main contribution lies in its holistic approach to integrating AI into scientific research, emphasizing the importance of accountability and governance. However, the absence of specific technical details and quantitative results limits its immediate practical impact. The paper's significance lies in its potential to inspire further research and discussion on the role of AI in scientific discovery and the need for responsible development and deployment of such systems.